Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Idnk-204ENSMUST00000226010 1898 ntBASIC18.62■□□□□ 0.57
Fam78aQ8C552 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.62■□□□□ 0.57
Fam78aQ8C552 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam78aQ8C552 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam78aQ8C552 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam78aQ8C552 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Fam78aQ8C552 Gm7284-201ENSMUST00000131667 944 ntBASIC18.61■□□□□ 0.57
Fam78aQ8C552 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam78aQ8C552 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam78aQ8C552 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Fam78aQ8C552 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam78aQ8C552 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Gm9103-201ENSMUST00000119371 405 ntBASIC18.59■□□□□ 0.57
Fam78aQ8C552 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Gm5587-201ENSMUST00000206270 674 ntBASIC18.59■□□□□ 0.57
Fam78aQ8C552 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fam78aQ8C552 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam78aQ8C552 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam78aQ8C552 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam78aQ8C552 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Fam78aQ8C552 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Gm27741-201ENSMUST00000185060 237 ntBASIC18.58■□□□□ 0.56
Fam78aQ8C552 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam78aQ8C552 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.57■□□□□ 0.56
Fam78aQ8C552 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Fam78aQ8C552 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms