Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.65■□□□□ 0.1
Rft1Q8C3B8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rft1Q8C3B8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Rft1Q8C3B8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.64■□□□□ 0.09
Rft1Q8C3B8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.64■□□□□ 0.09
Rft1Q8C3B8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rft1Q8C3B8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rft1Q8C3B8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rft1Q8C3B8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rft1Q8C3B8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rft1Q8C3B8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rft1Q8C3B8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rft1Q8C3B8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms