Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Trmt13-210ENSMUST00000198454 880 ntBASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trerf1Q8BXJ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trerf1Q8BXJ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.4■□□□□ 0.54
Trerf1Q8BXJ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Trerf1Q8BXJ2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trerf1Q8BXJ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trerf1Q8BXJ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms