Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap1Q8BTW8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm10231-201ENSMUST00000181584 441 ntBASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm10175-202ENSMUST00000208752 441 ntBASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap1Q8BTW8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk5rap1Q8BTW8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk5rap1Q8BTW8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdk5rap1Q8BTW8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk5rap1Q8BTW8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms