Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Gm13234-201ENSMUST00000120010 747 ntBASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 AV356131-201ENSMUST00000206201 750 ntBASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf7Q8BTV2 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf7Q8BTV2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf7Q8BTV2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf7Q8BTV2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cpsf7Q8BTV2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf7Q8BTV2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf7Q8BTV2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf7Q8BTV2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf7Q8BTV2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf7Q8BTV2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf7Q8BTV2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms