Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rd3Q8BRE0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Fst-202ENSMUST00000223640 2612 ntBASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Gm7791-201ENSMUST00000219066 539 ntBASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rd3Q8BRE0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Gm29791-202ENSMUST00000207888 369 ntBASIC18.59■□□□□ 0.57
Rd3Q8BRE0 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rd3Q8BRE0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.58■□□□□ 0.57
Rd3Q8BRE0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rd3Q8BRE0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rd3Q8BRE0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rd3Q8BRE0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.58■□□□□ 0.56
Rd3Q8BRE0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rd3Q8BRE0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rd3Q8BRE0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rd3Q8BRE0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.58■□□□□ 0.56
Rd3Q8BRE0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rd3Q8BRE0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rd3Q8BRE0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms