Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4Q8BQZ5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4Q8BQZ5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Gm22240-201ENSMUST00000175225 82 ntBASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4Q8BQZ5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Gm8520-201ENSMUST00000186517 868 ntBASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Cpsf4Q8BQZ5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cpsf4Q8BQZ5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Gm11927-201ENSMUST00000118472 759 ntBASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cpsf4Q8BQZ5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cpsf4Q8BQZ5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cpsf4Q8BQZ5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms