Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Mir2861-201ENSMUST00000175539 82 ntBASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Gm18025-201ENSMUST00000221733 862 ntBASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm4Q8BKA3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
Srrm4Q8BKA3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Gm42545-201ENSMUST00000202755 922 ntBASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Srrm4Q8BKA3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Srrm4Q8BKA3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Gm43183-201ENSMUST00000200632 547 ntBASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm4Q8BKA3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.15■□□□□ 0.02
Srrm4Q8BKA3 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms