Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp1Q8BJQ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Mir5130-201ENSMUST00000175160 84 ntBASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp1Q8BJQ2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp1Q8BJQ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp1Q8BJQ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.58■□□□□ 0.57
Usp1Q8BJQ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.58■□□□□ 0.57
Usp1Q8BJQ2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.58■□□□□ 0.56
Usp1Q8BJQ2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp1Q8BJQ2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms