Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcal1Q8BJL0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Smarcal1Q8BJL0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcal1Q8BJL0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcal1Q8BJL0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcal1Q8BJL0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Gm7284-201ENSMUST00000131667 944 ntBASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Gm7213-201ENSMUST00000215977 950 ntBASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcal1Q8BJL0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcal1Q8BJL0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcal1Q8BJL0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Gm11355-201ENSMUST00000121120 306 ntBASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smarcal1Q8BJL0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcal1Q8BJL0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcal1Q8BJL0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcal1Q8BJL0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms