Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh20Q8BIZ0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh20Q8BIZ0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh20Q8BIZ0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh20Q8BIZ0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh20Q8BIZ0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.08■□□□□ 0.32
Pcdh20Q8BIZ0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh20Q8BIZ0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms