Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Gm38285-201ENSMUST00000192928 922 ntBASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rnf38Q8BI21 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf38Q8BI21 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf38Q8BI21 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rnf38Q8BI21 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Gm7290-201ENSMUST00000104990 617 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Gm12918-201ENSMUST00000120234 636 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Gm15710-201ENSMUST00000121821 636 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Gm5075-201ENSMUST00000196916 622 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf38Q8BI21 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.87■□□□□ 0.29
Rnf38Q8BI21 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.86■□□□□ 0.29
Rnf38Q8BI21 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Zfp783-201ENSMUST00000095946 670 ntBASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf38Q8BI21 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms