Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smndc1Q8BGT7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smndc1Q8BGT7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smndc1Q8BGT7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smndc1Q8BGT7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smndc1Q8BGT7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Gm37179-201ENSMUST00000194862 823 ntBASIC17■□□□□ 0.31
Smndc1Q8BGT7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smndc1Q8BGT7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.99■□□□□ 0.31
Smndc1Q8BGT7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Gm8969-201ENSMUST00000199694 526 ntBASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smndc1Q8BGT7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smndc1Q8BGT7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms