Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nrde2Q80XC6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nrde2Q80XC6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nrde2Q80XC6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nrde2Q80XC6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.78■□□□□ 0.44
Nrde2Q80XC6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nrde2Q80XC6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nrde2Q80XC6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nrde2Q80XC6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nrde2Q80XC6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nrde2Q80XC6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nrde2Q80XC6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gm2274-201ENSMUST00000184539 609 ntBASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nrde2Q80XC6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Gm27741-201ENSMUST00000185060 237 ntBASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.75■□□□□ 0.43
Nrde2Q80XC6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nrde2Q80XC6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Gm14859-201ENSMUST00000117752 357 ntBASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Gm33142-201ENSMUST00000193913 867 ntBASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nrde2Q80XC6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nrde2Q80XC6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms