Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.72■□□□□ 0.27
Vrk1Q80X41 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.72■□□□□ 0.27
Vrk1Q80X41 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vrk1Q80X41 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vrk1Q80X41 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vrk1Q80X41 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vrk1Q80X41 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Vrk1Q80X41 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vrk1Q80X41 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Gm10418-201ENSMUST00000100943 576 ntBASIC16.7■□□□□ 0.26
Vrk1Q80X41 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Vrk1Q80X41 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.7■□□□□ 0.26
Vrk1Q80X41 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vrk1Q80X41 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.69■□□□□ 0.26
Vrk1Q80X41 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vrk1Q80X41 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.69■□□□□ 0.26
Vrk1Q80X41 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Gm22697-201ENSMUST00000175194 63 ntBASIC16.68■□□□□ 0.26
Vrk1Q80X41 Gm6345-202ENSMUST00000180900 204 ntBASIC16.68■□□□□ 0.26
Vrk1Q80X41 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.68■□□□□ 0.26
Vrk1Q80X41 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Gm18101-201ENSMUST00000215769 548 ntBASIC16.68■□□□□ 0.26
Vrk1Q80X41 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.68■□□□□ 0.26
Vrk1Q80X41 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vrk1Q80X41 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vrk1Q80X41 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vrk1Q80X41 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms