Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srrm3Q80WV7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srrm3Q80WV7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Dancr-204ENSMUST00000132389 2347 ntBASIC18.24■□□□□ 0.51
Srrm3Q80WV7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.24■□□□□ 0.51
Srrm3Q80WV7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm3Q80WV7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm3Q80WV7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm3Q80WV7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms