Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim36Q80WG7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.94■□□□□ 0.3
Trim36Q80WG7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.94■□□□□ 0.3
Trim36Q80WG7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Gm20760-201ENSMUST00000179197 648 ntBASIC16.93■□□□□ 0.3
Trim36Q80WG7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.93■□□□□ 0.3
Trim36Q80WG7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim36Q80WG7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.92■□□□□ 0.3
Trim36Q80WG7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.92■□□□□ 0.3
Trim36Q80WG7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.92■□□□□ 0.3
Trim36Q80WG7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.92■□□□□ 0.3
Trim36Q80WG7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim36Q80WG7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim36Q80WG7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.9■□□□□ 0.3
Trim36Q80WG7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.9■□□□□ 0.3
Trim36Q80WG7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim36Q80WG7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms