Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
Usp8Q80U87 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp8Q80U87 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.57■□□□□ 0.4
Usp8Q80U87 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp8Q80U87 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp8Q80U87 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp8Q80U87 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp8Q80U87 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Usp8Q80U87 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp8Q80U87 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp8Q80U87 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp8Q80U87 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.55■□□□□ 0.4
Usp8Q80U87 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp8Q80U87 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.55■□□□□ 0.4
Usp8Q80U87 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp8Q80U87 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Gm13148-201ENSMUST00000118892 745 ntBASIC17.54■□□□□ 0.4
Usp8Q80U87 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp8Q80U87 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp8Q80U87 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Usp8Q80U87 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp8Q80U87 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.54■□□□□ 0.4
Usp8Q80U87 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Mir5133-201ENSMUST00000174955 77 ntBASIC17.53■□□□□ 0.4
Usp8Q80U87 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp8Q80U87 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp8Q80U87 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp8Q80U87 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms