Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Rpap1Q80TE0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Gm45328-201ENSMUST00000210942 917 ntBASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC27.22■■□□□ 1.95
Rpap1Q80TE0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC27.22■■□□□ 1.95
Rpap1Q80TE0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Rpap1Q80TE0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rpap1Q80TE0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC27.2■■□□□ 1.94
Rpap1Q80TE0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rpap1Q80TE0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 AW822252-206ENSMUST00000208904 237 ntBASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Birc2-201ENSMUST00000054878 378 ntBASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC27.19■■□□□ 1.94
Rpap1Q80TE0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Idnk-204ENSMUST00000226010 1898 ntBASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rpap1Q80TE0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Gm43231-201ENSMUST00000202960 2258 ntBASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Gm15794-201ENSMUST00000120182 631 ntBASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Gm43514-201ENSMUST00000198852 424 ntBASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rpap1Q80TE0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Rpap1Q80TE0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rpap1Q80TE0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rpap1Q80TE0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rpap1Q80TE0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rpap1Q80TE0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Rpap1Q80TE0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Rpap1Q80TE0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Rpap1Q80TE0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC27.14■■□□□ 1.94
Rpap1Q80TE0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Rpap1Q80TE0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC27.14■■□□□ 1.94
Rpap1Q80TE0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
Rpap1Q80TE0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Rpap1Q80TE0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Rpap1Q80TE0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
Rpap1Q80TE0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms