Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Gm7153-201ENSMUST00000117092 455 ntBASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38bQ80SY5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38bQ80SY5 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.27■□□□□ 0.51
Prpf38bQ80SY5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf38bQ80SY5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38bQ80SY5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Gm10138-203ENSMUST00000206952 366 ntBASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38bQ80SY5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Gm43514-201ENSMUST00000198852 424 ntBASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Prpf38bQ80SY5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Gm7284-201ENSMUST00000131667 944 ntBASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Gm18025-201ENSMUST00000221733 862 ntBASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf38bQ80SY5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38bQ80SY5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms