Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.16■□□□□ 0.18
Pif1Q80SX8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.15■□□□□ 0.18
Pif1Q80SX8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pif1Q80SX8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pif1Q80SX8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.13■□□□□ 0.17
Pif1Q80SX8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.13■□□□□ 0.17
Pif1Q80SX8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Gm6345-202ENSMUST00000180900 204 ntBASIC16.13■□□□□ 0.17
Pif1Q80SX8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pif1Q80SX8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.12■□□□□ 0.17
Pif1Q80SX8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.12■□□□□ 0.17
Pif1Q80SX8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pif1Q80SX8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Gm18101-201ENSMUST00000215769 548 ntBASIC16.11■□□□□ 0.17
Pif1Q80SX8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pif1Q80SX8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.1■□□□□ 0.17
Pif1Q80SX8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pif1Q80SX8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms