Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.25■□□□□ 0.99
Sned1Q70E20 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sned1Q70E20 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sned1Q70E20 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sned1Q70E20 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.24■□□□□ 0.99
Sned1Q70E20 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.24■□□□□ 0.99
Sned1Q70E20 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sned1Q70E20 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Sned1Q70E20 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sned1Q70E20 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.23■□□□□ 0.99
Sned1Q70E20 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.23■□□□□ 0.99
Sned1Q70E20 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.23■□□□□ 0.99
Sned1Q70E20 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sned1Q70E20 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sned1Q70E20 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.23■□□□□ 0.99
Sned1Q70E20 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Sned1Q70E20 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sned1Q70E20 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sned1Q70E20 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.22■□□□□ 0.99
Sned1Q70E20 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.22■□□□□ 0.99
Sned1Q70E20 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.22■□□□□ 0.99
Sned1Q70E20 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sned1Q70E20 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.22■□□□□ 0.99
Sned1Q70E20 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sned1Q70E20 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.21■□□□□ 0.99
Sned1Q70E20 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Sned1Q70E20 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 BC021767-201ENSMUST00000126387 1716 ntBASIC21.21■□□□□ 0.99
Sned1Q70E20 Gm12644-201ENSMUST00000119935 606 ntBASIC21.21■□□□□ 0.99
Sned1Q70E20 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.21■□□□□ 0.99
Sned1Q70E20 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Sned1Q70E20 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.21■□□□□ 0.99
Sned1Q70E20 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sned1Q70E20 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Sned1Q70E20 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Gm11594-201ENSMUST00000122313 162 ntBASIC21.2■□□□□ 0.98
Sned1Q70E20 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.2■□□□□ 0.98
Sned1Q70E20 Mir5131-201ENSMUST00000175426 93 ntBASIC21.2■□□□□ 0.98
Sned1Q70E20 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.2■□□□□ 0.98
Sned1Q70E20 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sned1Q70E20 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sned1Q70E20 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sned1Q70E20 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44357-201ENSMUST00000195897 142 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm19658-201ENSMUST00000196231 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44367-201ENSMUST00000196836 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44350-201ENSMUST00000197197 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44390-201ENSMUST00000197533 144 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44313-201ENSMUST00000198018 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44486-201ENSMUST00000198508 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44454-201ENSMUST00000198541 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44314-201ENSMUST00000199263 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44394-201ENSMUST00000199558 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44484-201ENSMUST00000199873 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44466-201ENSMUST00000200264 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm44359-201ENSMUST00000200671 138 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.19■□□□□ 0.98
Sned1Q70E20 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Sned1Q70E20 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sned1Q70E20 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms