Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nudcd1Q6PIP5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Gm12085-201ENSMUST00000119263 940 ntBASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nudcd1Q6PIP5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nudcd1Q6PIP5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nudcd1Q6PIP5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nudcd1Q6PIP5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nudcd1Q6PIP5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Gm38027-201ENSMUST00000192315 235 ntBASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nudcd1Q6PIP5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
Nudcd1Q6PIP5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Gm27463-201ENSMUST00000183569 57 ntBASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nudcd1Q6PIP5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.61■□□□□ 0.41
Nudcd1Q6PIP5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms