Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarca1Q6PGB8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.47■□□□□ 0.71
Smarca1Q6PGB8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarca1Q6PGB8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smarca1Q6PGB8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarca1Q6PGB8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarca1Q6PGB8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarca1Q6PGB8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Gm42545-201ENSMUST00000202755 922 ntBASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarca1Q6PGB8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Gm37292-201ENSMUST00000192062 758 ntBASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca1Q6PGB8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca1Q6PGB8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Mir2861-201ENSMUST00000175539 82 ntBASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca1Q6PGB8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms