Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Srsf1Q6PDM2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Gm5264-201ENSMUST00000190584 848 ntBASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Il3ra-202ENSMUST00000223589 738 ntBASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Srsf1Q6PDM2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Srsf1Q6PDM2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm14057-201ENSMUST00000120631 482 ntBASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm10052-201ENSMUST00000168019 960 ntBASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm7729-201ENSMUST00000050143 801 ntBASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Srsf1Q6PDM2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Gm23935-201ENSMUST00000102303 57 ntBASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Gm24270-201ENSMUST00000102326 57 ntBASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Gm24245-201ENSMUST00000157318 57 ntBASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srsf1Q6PDM2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms