Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Idnk-204ENSMUST00000226010 1898 ntBASIC19.64■□□□□ 0.73
Abcf1Q6P542 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.64■□□□□ 0.73
Abcf1Q6P542 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Gm22325-201ENSMUST00000158904 308 ntBASIC19.63■□□□□ 0.73
Abcf1Q6P542 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abcf1Q6P542 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Abcf1Q6P542 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.62■□□□□ 0.73
Abcf1Q6P542 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abcf1Q6P542 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abcf1Q6P542 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.6■□□□□ 0.73
Abcf1Q6P542 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abcf1Q6P542 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abcf1Q6P542 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.58■□□□□ 0.73
Abcf1Q6P542 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abcf1Q6P542 Gm12441-201ENSMUST00000121806 588 ntBASIC19.58■□□□□ 0.72
Abcf1Q6P542 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms