Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.81■□□□□ 0.92
Best3Q6H1V1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Best3Q6H1V1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Gm45328-201ENSMUST00000210942 917 ntBASIC20.8■□□□□ 0.92
Best3Q6H1V1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Best3Q6H1V1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.79■□□□□ 0.92
Best3Q6H1V1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.79■□□□□ 0.92
Best3Q6H1V1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Best3Q6H1V1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Gm7461-201ENSMUST00000058918 827 ntBASIC20.78■□□□□ 0.92
Best3Q6H1V1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Best3Q6H1V1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.77■□□□□ 0.92
Best3Q6H1V1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Gm18115-201ENSMUST00000221209 621 ntBASIC20.77■□□□□ 0.92
Best3Q6H1V1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Fst-202ENSMUST00000223640 2612 ntBASIC20.77■□□□□ 0.92
Best3Q6H1V1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Best3Q6H1V1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Best3Q6H1V1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Best3Q6H1V1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.77■□□□□ 0.91
Best3Q6H1V1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.76■□□□□ 0.91
Best3Q6H1V1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Best3Q6H1V1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.75■□□□□ 0.91
Best3Q6H1V1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.75■□□□□ 0.91
Best3Q6H1V1 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.75■□□□□ 0.91
Best3Q6H1V1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Best3Q6H1V1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Best3Q6H1V1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms