Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga7Q6DD96 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Gm44487-201ENSMUST00000205145 325 ntBASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga7Q6DD96 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Mir5133-201ENSMUST00000174955 77 ntBASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Rab3c-203ENSMUST00000224180 967 ntBASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhga7Q6DD96 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Flg-201ENSMUST00000050758 1488 ntBASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga7Q6DD96 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.96■□□□□ 0.31
Pcdhga7Q6DD96 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms