Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scube3Q66PY1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scube3Q66PY1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.4■□□□□ 0.54
Scube3Q66PY1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.4■□□□□ 0.54
Scube3Q66PY1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scube3Q66PY1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.39■□□□□ 0.53
Scube3Q66PY1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.39■□□□□ 0.53
Scube3Q66PY1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.39■□□□□ 0.53
Scube3Q66PY1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.38■□□□□ 0.53
Scube3Q66PY1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.38■□□□□ 0.53
Scube3Q66PY1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.38■□□□□ 0.53
Scube3Q66PY1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scube3Q66PY1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.37■□□□□ 0.53
Scube3Q66PY1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Mir6982-201ENSMUST00000184354 68 ntBASIC18.37■□□□□ 0.53
Scube3Q66PY1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.37■□□□□ 0.53
Scube3Q66PY1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scube3Q66PY1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Scube3Q66PY1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Gm37055-201ENSMUST00000191866 133 ntBASIC18.36■□□□□ 0.53
Scube3Q66PY1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.36■□□□□ 0.53
Scube3Q66PY1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scube3Q66PY1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.35■□□□□ 0.53
Scube3Q66PY1 Timm23-208ENSMUST00000226683 750 ntBASIC18.35■□□□□ 0.53
Scube3Q66PY1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.35■□□□□ 0.53
Scube3Q66PY1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms