Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.33■■□□□ 1
Col11a2Q64739 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Col11a2Q64739 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col11a2Q64739 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col11a2Q64739 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.33■■□□□ 1
Col11a2Q64739 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.33■■□□□ 1
Col11a2Q64739 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col11a2Q64739 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.32■■□□□ 1
Col11a2Q64739 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.32■■□□□ 1
Col11a2Q64739 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Col11a2Q64739 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Col11a2Q64739 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.32■■□□□ 1
Col11a2Q64739 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Gm18206-201ENSMUST00000207027 926 ntBASIC21.32■■□□□ 1
Col11a2Q64739 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col11a2Q64739 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Col11a2Q64739 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.31■■□□□ 1
Col11a2Q64739 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col11a2Q64739 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.31■■□□□ 1
Col11a2Q64739 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col11a2Q64739 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Col11a2Q64739 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.3■■□□□ 1
Col11a2Q64739 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Col11a2Q64739 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Col11a2Q64739 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.3■■□□□ 1
Col11a2Q64739 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col11a2Q64739 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.29■■□□□ 1
Col11a2Q64739 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col11a2Q64739 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col11a2Q64739 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.29■■□□□ 1
Col11a2Q64739 Gm2651-201ENSMUST00000203560 838 ntBASIC21.29■■□□□ 1
Col11a2Q64739 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Col11a2Q64739 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Col11a2Q64739 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.28■■□□□ 1
Col11a2Q64739 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.28■■□□□ 1
Col11a2Q64739 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.28■■□□□ 1
Col11a2Q64739 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.28■■□□□ 1
Col11a2Q64739 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col11a2Q64739 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col11a2Q64739 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.27■■□□□ 1
Col11a2Q64739 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col11a2Q64739 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.27■■□□□ 1
Col11a2Q64739 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Col11a2Q64739 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col11a2Q64739 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.27■■□□□ 1
Col11a2Q64739 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col11a2Q64739 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.26■□□□□ 0.99
Col11a2Q64739 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.26■□□□□ 0.99
Col11a2Q64739 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Col11a2Q64739 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.26■□□□□ 0.99
Col11a2Q64739 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col11a2Q64739 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col11a2Q64739 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col11a2Q64739 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col11a2Q64739 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col11a2Q64739 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.26■□□□□ 0.99
Col11a2Q64739 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms