Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.61■□□□□ 0.25
AtmQ62388 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.6■□□□□ 0.25
AtmQ62388 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AtmQ62388 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.6■□□□□ 0.25
AtmQ62388 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AtmQ62388 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Gm23935-201ENSMUST00000102303 57 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Gm24270-201ENSMUST00000102326 57 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Gm24245-201ENSMUST00000157318 57 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
AtmQ62388 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AtmQ62388 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AtmQ62388 Gm26039-201ENSMUST00000158152 144 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Gm18195-201ENSMUST00000207604 706 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.59■□□□□ 0.25
AtmQ62388 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.59■□□□□ 0.25
AtmQ62388 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AtmQ62388 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AtmQ62388 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.58■□□□□ 0.24
AtmQ62388 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
AtmQ62388 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.58■□□□□ 0.24
AtmQ62388 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AtmQ62388 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AtmQ62388 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AtmQ62388 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AtmQ62388 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.58■□□□□ 0.24
AtmQ62388 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.58■□□□□ 0.24
AtmQ62388 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AtmQ62388 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AtmQ62388 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.57■□□□□ 0.24
AtmQ62388 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.57■□□□□ 0.24
AtmQ62388 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
AtmQ62388 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
AtmQ62388 Gm6736-201ENSMUST00000166583 948 ntBASIC16.57■□□□□ 0.24
AtmQ62388 Gm5264-201ENSMUST00000190584 848 ntBASIC16.57■□□□□ 0.24
AtmQ62388 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.57■□□□□ 0.24
AtmQ62388 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AtmQ62388 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.56■□□□□ 0.24
AtmQ62388 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.56■□□□□ 0.24
AtmQ62388 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Gm27702-201ENSMUST00000184512 56 ntBASIC16.56■□□□□ 0.24
AtmQ62388 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.56■□□□□ 0.24
AtmQ62388 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.56■□□□□ 0.24
AtmQ62388 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AtmQ62388 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AtmQ62388 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms