Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.69■□□□□ 0.58
Six2Q62232 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Six2Q62232 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Six2Q62232 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six2Q62232 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.68■□□□□ 0.58
Six2Q62232 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.68■□□□□ 0.58
Six2Q62232 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Six2Q62232 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.68■□□□□ 0.58
Six2Q62232 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.68■□□□□ 0.58
Six2Q62232 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.68■□□□□ 0.58
Six2Q62232 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.68■□□□□ 0.58
Six2Q62232 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six2Q62232 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.67■□□□□ 0.58
Six2Q62232 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Gm18666-201ENSMUST00000190039 958 ntBASIC18.67■□□□□ 0.58
Six2Q62232 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.67■□□□□ 0.58
Six2Q62232 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.67■□□□□ 0.58
Six2Q62232 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Six2Q62232 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six2Q62232 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Six2Q62232 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Gm5643-201ENSMUST00000117081 966 ntBASIC18.66■□□□□ 0.58
Six2Q62232 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.66■□□□□ 0.58
Six2Q62232 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.66■□□□□ 0.58
Six2Q62232 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six2Q62232 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.65■□□□□ 0.58
Six2Q62232 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.65■□□□□ 0.58
Six2Q62232 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.65■□□□□ 0.58
Six2Q62232 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.65■□□□□ 0.58
Six2Q62232 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six2Q62232 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six2Q62232 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six2Q62232 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Six2Q62232 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Six2Q62232 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Six2Q62232 Gm10653-202ENSMUST00000139570 835 ntBASIC18.64■□□□□ 0.57
Six2Q62232 Gm10698-201ENSMUST00000182663 604 ntBASIC18.64■□□□□ 0.57
Six2Q62232 Gm43183-201ENSMUST00000200632 547 ntBASIC18.64■□□□□ 0.57
Six2Q62232 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Six2Q62232 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six2Q62232 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.63■□□□□ 0.57
Six2Q62232 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six2Q62232 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms