Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.65■□□□□ 0.9
Ctr9Q62018 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Gm13559-201ENSMUST00000120476 863 ntBASIC20.65■□□□□ 0.9
Ctr9Q62018 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ctr9Q62018 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctr9Q62018 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ctr9Q62018 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ctr9Q62018 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ctr9Q62018 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ctr9Q62018 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ctr9Q62018 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Gm9987-201ENSMUST00000069768 567 ntBASIC20.64■□□□□ 0.89
Ctr9Q62018 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Ctr9Q62018 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctr9Q62018 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ctr9Q62018 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ctr9Q62018 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ctr9Q62018 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.63■□□□□ 0.89
Ctr9Q62018 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.63■□□□□ 0.89
Ctr9Q62018 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.63■□□□□ 0.89
Ctr9Q62018 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctr9Q62018 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Ctr9Q62018 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Ctr9Q62018 Gm6433-201ENSMUST00000118634 875 ntBASIC20.62■□□□□ 0.89
Ctr9Q62018 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.62■□□□□ 0.89
Ctr9Q62018 Gm24841-201ENSMUST00000158676 357 ntBASIC20.62■□□□□ 0.89
Ctr9Q62018 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Grk6-206ENSMUST00000224995 2971 ntBASIC20.62■□□□□ 0.89
Ctr9Q62018 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.62■□□□□ 0.89
Ctr9Q62018 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Ctr9Q62018 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctr9Q62018 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ctr9Q62018 Rarb-207ENSMUST00000225921 2756 ntBASIC20.61■□□□□ 0.89
Ctr9Q62018 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ctr9Q62018 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ctr9Q62018 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.61■□□□□ 0.89
Ctr9Q62018 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctr9Q62018 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.61■□□□□ 0.89
Ctr9Q62018 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.6■□□□□ 0.89
Ctr9Q62018 Gm13836-201ENSMUST00000121159 501 ntBASIC20.6■□□□□ 0.89
Ctr9Q62018 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ctr9Q62018 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctr9Q62018 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Ctr9Q62018 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ctr9Q62018 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ctr9Q62018 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms