Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
Ift88Q61371 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Ift88Q61371 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.43■□□□□ 0.7
Ift88Q61371 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ift88Q61371 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ift88Q61371 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ift88Q61371 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Gm7290-201ENSMUST00000104990 617 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Gm12918-201ENSMUST00000120234 636 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Gm15710-201ENSMUST00000121821 636 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Gm6211-202ENSMUST00000167849 925 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
Ift88Q61371 Gm5075-201ENSMUST00000196916 622 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ift88Q61371 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.42■□□□□ 0.7
Ift88Q61371 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.42■□□□□ 0.7
Ift88Q61371 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ift88Q61371 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ift88Q61371 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ift88Q61371 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ift88Q61371 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ift88Q61371 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ift88Q61371 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Zfp783-201ENSMUST00000095946 670 ntBASIC19.41■□□□□ 0.7
Ift88Q61371 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ift88Q61371 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.41■□□□□ 0.7
Ift88Q61371 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.41■□□□□ 0.7
Ift88Q61371 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ift88Q61371 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ift88Q61371 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Mir8112-201ENSMUST00000184382 131 ntBASIC19.4■□□□□ 0.7
Ift88Q61371 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.4■□□□□ 0.7
Ift88Q61371 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.4■□□□□ 0.7
Ift88Q61371 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Ift88Q61371 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ift88Q61371 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ift88Q61371 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ift88Q61371 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.4■□□□□ 0.7
Ift88Q61371 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ift88Q61371 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ift88Q61371 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ift88Q61371 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.39■□□□□ 0.7
Ift88Q61371 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Ift88Q61371 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
Ift88Q61371 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ift88Q61371 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ift88Q61371 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ift88Q61371 Gm10418-201ENSMUST00000100943 576 ntBASIC19.38■□□□□ 0.69
Ift88Q61371 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ift88Q61371 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.38■□□□□ 0.69
Ift88Q61371 Gm44549-201ENSMUST00000208351 577 ntBASIC19.38■□□□□ 0.69
Ift88Q61371 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ift88Q61371 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ift88Q61371 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ift88Q61371 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ift88Q61371 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms