Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Six4Q61321 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.68■□□□□ 0.42
Six4Q61321 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.68■□□□□ 0.42
Six4Q61321 Gm8969-201ENSMUST00000199694 526 ntBASIC17.68■□□□□ 0.42
Six4Q61321 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.68■□□□□ 0.42
Six4Q61321 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Six4Q61321 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Six4Q61321 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Six4Q61321 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Six4Q61321 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Six4Q61321 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.67■□□□□ 0.42
Six4Q61321 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Six4Q61321 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Six4Q61321 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Six4Q61321 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.66■□□□□ 0.42
Six4Q61321 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Six4Q61321 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
Six4Q61321 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Six4Q61321 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six4Q61321 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six4Q61321 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.65■□□□□ 0.42
Six4Q61321 Gm12085-201ENSMUST00000119263 940 ntBASIC17.65■□□□□ 0.42
Six4Q61321 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Six4Q61321 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six4Q61321 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six4Q61321 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six4Q61321 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six4Q61321 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
Six4Q61321 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.64■□□□□ 0.41
Six4Q61321 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Six4Q61321 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Six4Q61321 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.64■□□□□ 0.41
Six4Q61321 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.64■□□□□ 0.41
Six4Q61321 Gm24841-201ENSMUST00000158676 357 ntBASIC17.64■□□□□ 0.41
Six4Q61321 Mir5122-201ENSMUST00000175004 89 ntBASIC17.64■□□□□ 0.41
Six4Q61321 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.64■□□□□ 0.41
Six4Q61321 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six4Q61321 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Six4Q61321 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.63■□□□□ 0.41
Six4Q61321 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six4Q61321 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.63■□□□□ 0.41
Six4Q61321 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Six4Q61321 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six4Q61321 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six4Q61321 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms