Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scnn1aQ61180 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scnn1aQ61180 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scnn1aQ61180 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scnn1aQ61180 Gm23634-201ENSMUST00000175071 91 ntBASIC20.19■□□□□ 0.82
Scnn1aQ61180 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.19■□□□□ 0.82
Scnn1aQ61180 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.18■□□□□ 0.82
Scnn1aQ61180 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.18■□□□□ 0.82
Scnn1aQ61180 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scnn1aQ61180 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.17■□□□□ 0.82
Scnn1aQ61180 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Scnn1aQ61180 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.16■□□□□ 0.82
Scnn1aQ61180 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scnn1aQ61180 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Scnn1aQ61180 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Scnn1aQ61180 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scnn1aQ61180 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.14■□□□□ 0.81
Scnn1aQ61180 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Mir1668-201ENSMUST00000184114 107 ntBASIC20.14■□□□□ 0.81
Scnn1aQ61180 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scnn1aQ61180 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms