Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Sdf4Q61112 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sdf4Q61112 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdf4Q61112 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sdf4Q61112 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Sdf4Q61112 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.79■□□□□ 0.44
Sdf4Q61112 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.79■□□□□ 0.44
Sdf4Q61112 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.79■□□□□ 0.44
Sdf4Q61112 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sdf4Q61112 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.79■□□□□ 0.44
Sdf4Q61112 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdf4Q61112 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sdf4Q61112 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.78■□□□□ 0.44
Sdf4Q61112 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.78■□□□□ 0.44
Sdf4Q61112 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm13168-201ENSMUST00000121771 632 ntBASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm15378-201ENSMUST00000121894 207 ntBASIC17.78■□□□□ 0.44
Sdf4Q61112 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm8520-201ENSMUST00000186517 868 ntBASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.78■□□□□ 0.44
Sdf4Q61112 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.78■□□□□ 0.44
Sdf4Q61112 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdf4Q61112 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sdf4Q61112 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sdf4Q61112 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sdf4Q61112 Gm12382-201ENSMUST00000122005 922 ntBASIC17.77■□□□□ 0.44
Sdf4Q61112 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Gm42545-201ENSMUST00000202755 922 ntBASIC17.77■□□□□ 0.44
Sdf4Q61112 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.77■□□□□ 0.44
Sdf4Q61112 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdf4Q61112 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdf4Q61112 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdf4Q61112 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdf4Q61112 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdf4Q61112 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.76■□□□□ 0.43
Sdf4Q61112 Gm13401-201ENSMUST00000117074 291 ntBASIC17.76■□□□□ 0.43
Sdf4Q61112 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.76■□□□□ 0.43
Sdf4Q61112 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdf4Q61112 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.75■□□□□ 0.43
Sdf4Q61112 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Gm6576-201ENSMUST00000169678 883 ntBASIC17.75■□□□□ 0.43
Sdf4Q61112 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.75■□□□□ 0.43
Sdf4Q61112 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms