Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Gm27463-201ENSMUST00000183569 57 ntBASIC17.97■□□□□ 0.47
Slc6a4Q60857 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slc6a4Q60857 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.96■□□□□ 0.47
Slc6a4Q60857 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.96■□□□□ 0.47
Slc6a4Q60857 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Slc6a4Q60857 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.95■□□□□ 0.46
Slc6a4Q60857 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Gm7638-201ENSMUST00000121348 967 ntBASIC17.95■□□□□ 0.46
Slc6a4Q60857 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc6a4Q60857 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.94■□□□□ 0.46
Slc6a4Q60857 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.94■□□□□ 0.46
Slc6a4Q60857 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc6a4Q60857 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.93■□□□□ 0.46
Slc6a4Q60857 Mir8112-201ENSMUST00000184382 131 ntBASIC17.93■□□□□ 0.46
Slc6a4Q60857 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc6a4Q60857 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slc6a4Q60857 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Gm7791-201ENSMUST00000219066 539 ntBASIC17.92■□□□□ 0.46
Slc6a4Q60857 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc6a4Q60857 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Slc6a4Q60857 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms