Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Fst-202ENSMUST00000223640 2612 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm13401-201ENSMUST00000117074 291 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm4974-201ENSMUST00000209974 875 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm5417-201ENSMUST00000079706 384 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.46■□□□□ 0.23
Tnfaip3Q60769 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfaip3Q60769 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfaip3Q60769 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Tnfaip3Q60769 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfaip3Q60769 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Tnfaip3Q60769 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfaip3Q60769 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfaip3Q60769 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms