Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Xrcc1Q60596 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Grk6-206ENSMUST00000224995 2971 ntBASIC16.76■□□□□ 0.27
Xrcc1Q60596 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrcc1Q60596 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Xrcc1Q60596 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.75■□□□□ 0.27
Xrcc1Q60596 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrcc1Q60596 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Gm10517-202ENSMUST00000192970 758 ntBASIC16.73■□□□□ 0.27
Xrcc1Q60596 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.73■□□□□ 0.27
Xrcc1Q60596 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.73■□□□□ 0.27
Xrcc1Q60596 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.72■□□□□ 0.27
Xrcc1Q60596 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Xrcc1Q60596 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.72■□□□□ 0.27
Xrcc1Q60596 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.72■□□□□ 0.27
Xrcc1Q60596 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xrcc1Q60596 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms