Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Gm10517-202ENSMUST00000192970 758 ntBASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.64■□□□□ 0.57
Shroom1Q5SX79 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Gm27463-201ENSMUST00000183569 57 ntBASIC18.63■□□□□ 0.57
Shroom1Q5SX79 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom1Q5SX79 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Shroom1Q5SX79 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Gm38027-201ENSMUST00000192315 235 ntBASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom1Q5SX79 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Gm6659-201ENSMUST00000174752 547 ntBASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shroom1Q5SX79 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Gm18959-201ENSMUST00000208954 655 ntBASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom1Q5SX79 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom1Q5SX79 Gm10418-201ENSMUST00000100943 576 ntBASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Gm4974-201ENSMUST00000209974 875 ntBASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms