Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tsr1Q5SWD9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tsr1Q5SWD9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tsr1Q5SWD9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tsr1Q5SWD9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tsr1Q5SWD9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsr1Q5SWD9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsr1Q5SWD9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsr1Q5SWD9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsr1Q5SWD9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsr1Q5SWD9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsr1Q5SWD9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsr1Q5SWD9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms