Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Gm18284-201ENSMUST00000172604 624 ntBASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-3Q5R1I1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav7d-3Q5R1I1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-3Q5R1I1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav7d-3Q5R1I1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7d-3Q5R1I1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Gm6211-202ENSMUST00000167849 925 ntBASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms