Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-4Q5R1H9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav7d-4Q5R1H9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-4Q5R1H9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Spcs1-204ENSMUST00000226782 949 ntBASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-4Q5R1H9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-4Q5R1H9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms