Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav8d-1Q5R1H8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.37□□□□□ -0.11
Trav8d-1Q5R1H8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8d-1Q5R1H8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Gm27405-201ENSMUST00000184201 112 ntBASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Gm38205-201ENSMUST00000192243 258 ntBASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms