Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Haglr-201ENSMUST00000100000 2085 ntBASIC13.67□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm21956-201ENSMUST00000179946 522 ntBASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms