Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Birc2-201ENSMUST00000054878 378 ntBASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav8d-2Q5R1B6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Gm5867-201ENSMUST00000063197 592 ntBASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-2Q5R1B6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-2Q5R1B6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-2Q5R1B6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-2Q5R1B6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav8d-2Q5R1B6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav8d-2Q5R1B6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav8d-2Q5R1B6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav8d-2Q5R1B6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Mir8098-201ENSMUST00000184011 137 ntBASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav8d-2Q5R1B6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Olfr129-201ENSMUST00000122318 993 ntBASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav8d-2Q5R1B6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav8d-2Q5R1B6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms