Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm18666-201ENSMUST00000190039 958 ntBASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf20Q5DTM8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Gm12527-201ENSMUST00000117967 564 ntBASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.88■□□□□ 0.93
Rnf20Q5DTM8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Gm37856-201ENSMUST00000191634 999 ntBASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Trmt13-210ENSMUST00000198454 880 ntBASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf20Q5DTM8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.86■□□□□ 0.93
Rnf20Q5DTM8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf20Q5DTM8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Gm29257-201ENSMUST00000186115 639 ntBASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf20Q5DTM8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Gm18025-201ENSMUST00000221733 862 ntBASIC20.83■□□□□ 0.93
Rnf20Q5DTM8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf20Q5DTM8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rnf20Q5DTM8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.83■□□□□ 0.92
Rnf20Q5DTM8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Rnf20Q5DTM8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Gm6576-201ENSMUST00000169678 883 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms