Protein–RNA interactions for Protein: Q56A06

Tmtc2, Transmembrane and TPR repeat-containing protein 2, mousemouse

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc2Q56A06 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tmtc2Q56A06 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tmtc2Q56A06 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Gm12085-201ENSMUST00000119263 940 ntBASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmtc2Q56A06 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Gm38027-201ENSMUST00000192315 235 ntBASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmtc2Q56A06 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Gm3375-201ENSMUST00000203929 796 ntBASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmtc2Q56A06 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tmtc2Q56A06 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmtc2Q56A06 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Gm37055-201ENSMUST00000191866 133 ntBASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmtc2Q56A06 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmtc2Q56A06 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tmtc2Q56A06 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmtc2Q56A06 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tmtc2Q56A06 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Tmtc2Q56A06 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmtc2Q56A06 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms