Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rc3h1Q4VGL6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Gm18959-201ENSMUST00000208954 655 ntBASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rc3h1Q4VGL6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rc3h1Q4VGL6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rc3h1Q4VGL6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rc3h1Q4VGL6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rc3h1Q4VGL6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rc3h1Q4VGL6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rc3h1Q4VGL6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Mir8112-201ENSMUST00000184382 131 ntBASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Gm45058-201ENSMUST00000205810 766 ntBASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rc3h1Q4VGL6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rc3h1Q4VGL6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Gm2274-201ENSMUST00000184539 609 ntBASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rc3h1Q4VGL6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms